• V. Perlík, V. Sláma, C. N. Lincoln, H. Langhals, E. Riedle, T. Mančal, J. Hauer and F. ŠandaGeometric dependencies of vobronically mediated excitation transfer in rylene dyads, submitted (arXiv:1808.02467)
  • V. Sláma, F. Müh, T. Renger and T. MančalRole of environmental dynamic polarizability in static excited state properties of embedded molecular systems: Application to disordered fluorographene systems, submitted (arXiv:1808.02399)
  • V. Sláma, S. Rajabi and T. MančalFluorographene with Impurities as a Biomimetic Light-Harvesting Medium, submitted (arXiv:1801.08509)

Published in Journals


  • P. Malý and T. MančalSignatures of Exciton Delocalization and Exciton-Exciton Annihilation in Fluorescence-Detected Two-Dimensional Coherent Spectroscopy, accepted in J. Phys. Chem. Lett. (2018) (arXiv:1807.04846)
  • J. Seibt and T. MančalTreatment of Herzberg-Teller and non-Condon effects in optical spectra with Hierarchical Equations of Motion, accepted in Chem. Phys. (2018), (arXiv:1807.07475)
  • P. Malý, A. T. Gardiner, R. J. Cogdell,  R. van Grondelle, and T. MančalRobust light harvesting by noisy antenna, Phys. Chem. Chem. Phys. 20 (2018) 4360, DOI: 10.1039/c7cp06139k


  • T. P. J. Kruger, P. Maly, M. T. A. Alexandre, T. Mancal, C. Buchel, and R. van GrondelleHow reduced excitonic coupling enhances light harvesting in the main photosynthetic antennae of diatoms, Proc. Nat. Acad. Sci. U. S. A. 114 (2017) E11063, DOI: 10.1073/pnas.1714656115
  • J. Seibt, and T. MancalUltrafast energy transfer with competing channels: Non-equilibrium Foerster and Modifield Redfielf theories, J. Chem. Phys. 146 (2017) 147109, DOI: 10.1063/1.4981523
  • P. Maly, J. Ravensbergen, J. Kennis, R. van Grondelle, R. Croce, T. Mancal, and B. van Oort , Polarization-controlled Optimal Scatter Suppression in Transient Absorption Spectroscopy, Sci. Rep. 7 (2017) 43484, DOI: 10.1038/srep43484


  • J. Seibt, V. Slama and T. Mancal , Optical Spectroscopy and System-bath Interactions in Molecular Aggregates with Full Configuration Interaction Frenkel Exciton Model, Chem. Phys. 481 (2016) 218, DOI: 10.1016/j.chemphys.2016.08.017
  • F. Zheng, M. Jin, T. Mancal, and Y. Zhao , Study of Electronic Structures and Pigment-Protein Interactions inthe Reaction Center of Thermochromatium tepidum with Dynamic Environment, J. Phys. Chem. 120 (2016) 10046, DOI: 10.1021/acs.jpcb.6b06628
  • P. Maly, J. M. gruber, R. van Grondelle, and T. Mancal, Single Molecule Spectroscopy of Monomeric LHCII: Experiment and Theory, Sci. Rep. 6 (2016) 26230, DOI: 10.1038/srep26230 (arXiv:1512.00887)
  • P. Maly, O. J. G. Somsen, V. Novoderezhkin, T. Mancal, R. van Grondelle,The Role of Resonant Vibrations in Electronic Energy Transfer, ChemPhysChem 17 (2016) 1356,  DOI:  10.1002/cphc.20150096
  • P. Maly, J. M. Gruber, R. J. Cogdell, T. Mancal, R. van GrondelleUltrafast Energy Relaxation in single light-harvesting complexes, P. Natl. Acad. Sci. USA 113 (2016) 2934,  DOI:  10.1073/pnas.1522265113 (arXiv:1511.04936)


  • V. Perlik, J. Seibt, L. J. Cranston, R. J. Cogdell, C. N. Lincoln, J. Savolainen, F. Sanda, T. Mancal, J. HauerVibronic coupling explains the ultrafast carotenoid-to-bacteriochlorophyll energy transfer in natural and artificial light harvesters, J. Chem. Phys. 142 (2015) 2012434,  DOI:  10.1063/1.4919548 (arXiv:1502.06271)
  • C. Ramanan, M. Gruber, P. Maly, M. Negretti, V. Novoderezhkin, T. P. J. Krueger, T. Mancal, R. Croce, R. van Grondelle, The Role of Exciton Delocalization in the Major Photosynthetic Light-Harvesting Antenna of Plants, Biophys. J. 108 (2015) 1047, DOI: 10.1016/j.bpj.2015.01.019


  • J. Olsina, T. Kramer, Ch. Kreisbeck and T. MancalExact Stochastic Unraveling of an Optical Coherence Dynamics by Cumulant Expansion, J. Chem. Phys. 141 (2014) 164109, DOI:  10.1063/1.4898354 (arXiv:1309.0749)
  • A. Chenu, P. Maly and T. MancalDynamic Coherence in Excitonic Molecular Complexes under Various Excitation Conditions, Chem. Phys. 439 (2014) 100, DOI:  10.1016/j.chemphys.2014.05.008 (arXiv:1306.1693)
  • J. Dostal, T. Mancal, F. Vacha, J. Psencik, and D. Zigmantas Unraveling the nature of coherent beatings in chlorosomes, J. Chem. Phys. 140 (2014) 115103 , DOI:  10.1063/1.4868557
  • T. Mancal, J. Dostal, J. Psencik, and D. ZigmantasTransfer of Vibrational Coherence Through Incoherent Energy Transfer Process in Förster Limit, Can. J. Chemistry 92 (2014) 135, DOI:  10.1139/cjc-2013-0351

Journal articles before 2014

For papers of Tomáš Mančal from before 2014, please visit his old web page